polars for type ease, more done

Cargo.toml

@@ -8,3 +8,4 @@ rand = "0.9.1"
 paste = "1.0.15"
 rust_decimal = { version = "1.37", features = ["macros", "maths"] }
 rush_macro = { path = "rush_macro" }
+polars = { version = "0.46.0", features = ["lazy"]}

src/gp/args.rs

@@ -0,0 +1,37 @@
+use crate::gp::variation::Variation;
+use crate::push::state::Gene;
+use polars::prelude::*;
+use rust_decimal::prelude::*;
+use std::collections::HashMap;
+
+pub enum ClosingType {
+    Specified,
+    Balanced,
+    None,
+}
+
+struct PushArgs {
+    alignment_deviation: usize, // For alternation, std dev of deviation of index when alternating
+    alternation_rate: Decimal,  // For alternation, prob of switching parents at each location
+    closes: ClosingType,        // How push should automatically place Gene::Close into a plushy
+    dont_end: bool,             // If true, keep running until limit regardless of success
+    // downsample: bool, // Whether or not to downsample. TODO later with all the related args
+    elitism: bool, // Whether to always add the best individual to next generation
+    error_function: fn(&PushArgs, DataFrame, Vec<Gene>) -> Series, // The error function
+    instructions: Vec<Gene>, // Instructions to use in a run
+    max_init_plushy_size: usize, // max initial plushy size
+    max_generations: usize, // Max amount of generations
+    parent_selection: usize, // Selection to use, TODO change this later.
+    pop_size: usize, // Population size
+    replacement_rate: Decimal, // For uniform replacement, rate items replaced
+    use_simplification: bool, // Whether to use simplification at end of run
+    simplification_k: usize, // Max amt of genes to attempt removal during one round of simplification process
+    simplification_steps: usize, // How many attempts to find simplified genomes
+    use_single_thread: bool, // if true, only single threaded
+    step_limit: usize,       // Amount of steps a push interpreter can run for
+    testing_data: DataFrame, // The testing data, must be formatted the same as training data
+    tournament_size: usize,  // Tournament size for tournament selection
+    training_data: DataFrame, // The training data, must be formatted the same as testing data
+    umad_rate: Decimal,      // addition rate (deletion rate derived) for UMAD
+    variation: HashMap<Variation, Decimal>, // genetic operators and probability for use. should sum to 1,
+}

src/gp/genome.rs

@@ -103,26 +103,26 @@ pub fn plushy_to_push(genes: Vec<Gene>) -> Vec<Gene> {
         if plushy_buffer.is_empty() && has_openers(&push_buffer) {
             plushy_buffer.push(Gene::Close);
         } else if plushy_buffer.is_empty() {
-            return plushy_buffer;
+            return push_buffer;
         } else {
-            let first_gene = plushy_buffer.pop().unwrap();
+            let first_gene = plushy_buffer.remove(0);
             match &first_gene {
                 Gene::Close => {
                     if has_openers(&push_buffer) {
                         let mut index: Option<usize> = None;
-                        let mut opener: Option<&Gene> = None;
+                        let mut opener: Option<Gene> = None;
                         // not the most optimal iterating through the entire genome.
                         // Will do for now.
-                        for (ndx, el) in push_buffer.iter().enumerate() {
+                        for (ndx, el) in push_buffer.clone().into_iter().enumerate() {
                             if is_opener(&el) {
                                 index = Some(ndx);
                                 opener = Some(el);
                             }
                         }
-                        let post_open = push_buffer[(index.unwrap() + 1)..].to_vec();
+                        let post_open: Vec<_> = push_buffer.drain((index.unwrap() + 1)..).collect();
-                        let mut push_buffer = push_buffer[..index.unwrap()].to_vec();
+                        push_buffer.pop(); // Pop the close here
-                        push_buffer.extend(post_open);
+                        push_buffer.push(Gene::Block(post_open));
-                        if get_opener_count(opener.unwrap()) > &1u8 {
+                        if get_opener_count(&opener.clone().unwrap()) > &1u8 {
                             let opener_new = dec_opener(opener.unwrap().clone());
                             push_buffer.push(opener_new);
                         }
@@ -136,7 +136,7 @@ pub fn plushy_to_push(genes: Vec<Gene>) -> Vec<Gene> {
 
 #[cfg(test)]
 mod tests {
-    // use super::*;
+    use super::*;
     // use crate::instructions::vector::{string_iterate, vector_float_maximum};
     use crate::instructions::common::*;
     use crate::instructions::numeric::*;
@@ -156,13 +156,39 @@ mod tests {
     #[test]
     fn plushy_to_push_test() {
         let plushy = vec![
-            Gene::StateFunc(float_flush),
+            Gene::StateFunc(exec_swap),
-            Gene::StateFunc(exec_pop),
+            Gene::StateFunc(float_tan),
-            Gene::StateFunc(int_add),
+            Gene::StateFunc(int_pop),
-            Gene::StateFunc(float_rem),
             Gene::Close,
-            Gene::StateFunc(float_sub),
+            Gene::StateFunc(exec_flush),
+            Gene::Close,
+            Gene::StateFunc(boolean_pop),
+        ];
+        let res_push = plushy_to_push(plushy);
+        assert_eq!(
+            res_push,
+            vec![
+                StateFunc(exec_swap),
+                Gene::Block(vec![Gene::StateFunc(float_tan), Gene::StateFunc(int_pop)]),
+                Gene::Block(vec![Gene::StateFunc(exec_flush)]),
+                Gene::StateFunc(boolean_pop),
+            ]
+        );
+
+        let plushy = vec![
+            Gene::StateFunc(exec_swap),
+            Gene::StateFunc(float_tan),
+            Gene::StateFunc(int_pop),
             Gene::Close,
         ];
+        let res_push = plushy_to_push(plushy);
+        assert_eq!(
+            res_push,
+            vec![
+                StateFunc(exec_swap),
+                Gene::Block(vec![Gene::StateFunc(float_tan), Gene::StateFunc(int_pop)]),
+                Gene::Block(vec![]),
+            ]
+        )
     }
 }

src/gp/mod.rs

@@ -1 +1,5 @@
+pub mod args;
 pub mod genome;
+pub mod variation;
+
+// pub fn gp_loop

src/gp/variation.rs

@@ -0,0 +1,8 @@
+pub enum Variation {
+    Crossover,
+    Alternation,
+    TailAlignedCrossover,
+    UniformAddition,
+    UniformReplacement,
+    UniformDeletion,
+}