rowan.a.tl/propeller
1
0
Fork 0
Code Issues Pull Requests Actions Packages Projects Releases Wiki Activity
propeller/docs/propeller.downsample.html
Lee Spector b0aee912bf Update docs
2024-01-07 12:53:34 -05:00

17 lines
23 KiB
HTML
Raw Blame History

This file contains ambiguous Unicode characters

This file contains Unicode characters that might be confused with other characters. If you think that this is intentional, you can safely ignore this warning. Use the Escape button to reveal them.

<!DOCTYPE html PUBLIC ""
"">
<html><head><meta charset="UTF-8" /><title>propeller.downsample documentation</title><link rel="stylesheet" type="text/css" href="css/default.css" /><link rel="stylesheet" type="text/css" href="css/highlight.css" /><script type="text/javascript" src="js/highlight.min.js"></script><script type="text/javascript" src="js/jquery.min.js"></script><script type="text/javascript" src="js/page_effects.js"></script><script>hljs.initHighlightingOnLoad();</script></head><body><div id="header"><h2>Generated by <a href="https://github.com/weavejester/codox">Codox</a></h2><h1><a href="index.html"><span class="project-title"><span class="project-name">Propeller</span> <span class="project-version">0.3.2</span></span></a></h1></div><div class="sidebar primary"><h3 class="no-link"><span class="inner">Project</span></h3><ul class="index-link"><li class="depth-1 "><a href="index.html"><div class="inner">Index</div></a></li></ul><h3 class="no-link"><span class="inner">Topics</span></h3><ul><li class="depth-1 "><a href="A_Guide_To_Propeller.html"><div class="inner"><span>A Guide to Propeller</span></div></a></li><li class="depth-1 "><a href="Adding_Genetic_Operators.html"><div class="inner"><span>Adding Genetic Operators</span></div></a></li><li class="depth-1 "><a href="Adding_Problem.html"><div class="inner"><span>Adding a Problem</span></div></a></li><li class="depth-1 "><a href="Adding_Selection_Method.html"><div class="inner"><span>Adding a Selection Method</span></div></a></li><li class="depth-1 "><a href="Additional_Instructions.html"><div class="inner"><span>Additional Instructions</span></div></a></li><li class="depth-1 "><a href="Downsampling_training_data.html"><div class="inner"><span># Downsample Functions</span></div></a></li><li class="depth-1 "><a href="Generating_Documentation.html"><div class="inner"><span>Generating Documentation for Propeller</span></div></a></li></ul><h3 class="no-link"><span class="inner">Namespaces</span></h3><ul><li class="depth-1"><div class="no-link"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>propeller</span></div></div></li><li class="depth-2 branch current"><a href="propeller.downsample.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>downsample</span></div></a></li><li class="depth-2 branch"><a href="propeller.genome.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>genome</span></div></a></li><li class="depth-2 branch"><a href="propeller.gp.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>gp</span></div></a></li><li class="depth-2"><div class="no-link"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>problems</span></div></div></li><li class="depth-3"><div class="no-link"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>PSB1</span></div></div></li><li class="depth-4 branch"><a href="propeller.problems.PSB1.count-odds.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>count-odds</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB1.grade.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>grade</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB1.scrabble-score.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>scrabble-score</span></div></a></li><li class="depth-4"><a href="propeller.problems.PSB1.small-or-large.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>small-or-large</span></div></a></li><li class="depth-3"><div class="no-link"><div class="inner"><span class="tree" style="top: -145px;"><span class="top" style="height: 154px;"></span><span class="bottom"></span></span><span>PSB2</span></div></div></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.basement.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>basement</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.bouncing-balls.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>bouncing-balls</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.bowling.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>bowling</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.camel-case.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>camel-case</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.dice-game.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>dice-game</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.find-pair.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>find-pair</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.fizz-buzz.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>fizz-buzz</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.fuel-cost.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>fuel-cost</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.gcd.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>gcd</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.luhn.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>luhn</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.middle-character.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>middle-character</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.paired-digits.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>paired-digits</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.shopping-list.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>shopping-list</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.snow-day.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>snow-day</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.solve-boolean.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>solve-boolean</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.spin-words.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>spin-words</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.square-digits.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>square-digits</span></div></a></li><li class="depth-4 branch"><a href="propeller.problems.PSB2.substitution-cipher.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>substitution-cipher</span></div></a></li><li class="depth-4"><a href="propeller.problems.PSB2.twitter.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>twitter</span></div></a></li><li class="depth-3 branch"><a href="propeller.problems.UBall5D.html"><div class="inner"><span class="tree" style="top: -610px;"><span class="top" style="height: 619px;"></span><span class="bottom"></span></span><span>UBall5D</span></div></a></li><li class="depth-3"><div class="no-link"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>boolean</span></div></div></li><li class="depth-4 branch"><a href="propeller.problems.boolean.mul3.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>mul3</span></div></a></li><li class="depth-4"><a href="propeller.problems.boolean.mul4.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>mul4</span></div></a></li><li class="depth-3 branch"><a href="propeller.problems.complex-regression.html"><div class="inner"><span class="tree" style="top: -83px;"><span class="top" style="height: 92px;"></span><span class="bottom"></span></span><span>complex-regression</span></div></a></li><li class="depth-3 branch"><a href="propeller.problems.data-creation.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>data-creation</span></div></a></li><li class="depth-3 branch"><a href="propeller.problems.float-regression.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>float-regression</span></div></a></li><li class="depth-3 branch"><a href="propeller.problems.integer-regression.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>integer-regression</span></div></a></li><li class="depth-3 branch"><a href="propeller.problems.simple-classification.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>simple-classification</span></div></a></li><li class="depth-3"><div class="no-link"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>software</span></div></div></li><li class="depth-4 branch"><a href="propeller.problems.software.number-io.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>number-io</span></div></a></li><li class="depth-4"><a href="propeller.problems.software.smallest.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>smallest</span></div></a></li><li class="depth-3 branch"><a href="propeller.problems.string-classification.html"><div class="inner"><span class="tree" style="top: -83px;"><span class="top" style="height: 92px;"></span><span class="bottom"></span></span><span>string-classification</span></div></a></li><li class="depth-3"><a href="propeller.problems.valiant.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>valiant</span></div></a></li><li class="depth-2"><div class="no-link"><div class="inner"><span class="tree" style="top: -1230px;"><span class="top" style="height: 1239px;"></span><span class="bottom"></span></span><span>push</span></div></div></li><li class="depth-3"><a href="propeller.push.instructions.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>instructions</span></div></a></li><li class="depth-4 branch"><a href="propeller.push.instructions.bool.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>bool</span></div></a></li><li class="depth-4 branch"><a href="propeller.push.instructions.character.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>character</span></div></a></li><li class="depth-4 branch"><a href="propeller.push.instructions.code.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>code</span></div></a></li><li class="depth-4 branch"><a href="propeller.push.instructions.input-output.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>input-output</span></div></a></li><li class="depth-4 branch"><a href="propeller.push.instructions.numeric.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>numeric</span></div></a></li><li class="depth-4 branch"><a href="propeller.push.instructions.parentheses.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>parentheses</span></div></a></li><li class="depth-4 branch"><a href="propeller.push.instructions.polymorphic.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>polymorphic</span></div></a></li><li class="depth-4 branch"><a href="propeller.push.instructions.string.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>string</span></div></a></li><li class="depth-4"><a href="propeller.push.instructions.vector.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>vector</span></div></a></li><li class="depth-3 branch"><a href="propeller.push.interpreter.html"><div class="inner"><span class="tree" style="top: -300px;"><span class="top" style="height: 309px;"></span><span class="bottom"></span></span><span>interpreter</span></div></a></li><li class="depth-3 branch"><a href="propeller.push.limits.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>limits</span></div></a></li><li class="depth-3"><a href="propeller.push.state.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>state</span></div></a></li><li class="depth-2 branch"><a href="propeller.selection.html"><div class="inner"><span class="tree" style="top: -424px;"><span class="top" style="height: 433px;"></span><span class="bottom"></span></span><span>selection</span></div></a></li><li class="depth-2 branch"><a href="propeller.simplification.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>simplification</span></div></a></li><li class="depth-2"><div class="no-link"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>tools</span></div></div></li><li class="depth-3 branch"><a href="propeller.tools.calculus.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>calculus</span></div></a></li><li class="depth-3 branch"><a href="propeller.tools.character.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>character</span></div></a></li><li class="depth-3 branch"><a href="propeller.tools.distributions.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>distributions</span></div></a></li><li class="depth-3 branch"><a href="propeller.tools.math.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>math</span></div></a></li><li class="depth-3"><a href="propeller.tools.metrics.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>metrics</span></div></a></li><li class="depth-2 branch"><a href="propeller.utils.html"><div class="inner"><span class="tree" style="top: -176px;"><span class="top" style="height: 185px;"></span><span class="bottom"></span></span><span>utils</span></div></a></li><li class="depth-2"><a href="propeller.variation.html"><div class="inner"><span class="tree"><span class="top"></span><span class="bottom"></span></span><span>variation</span></div></a></li></ul></div><div class="sidebar secondary"><h3><a href="#top"><span class="inner">Public Vars</span></a></h3><ul><li class="depth-1"><a href="propeller.downsample.html#var-assign-indices-to-data"><div class="inner"><span>assign-indices-to-data</span></div></a></li><li class="depth-1"><a href="propeller.downsample.html#var-convert-to-elite-error"><div class="inner"><span>convert-to-elite-error</span></div></a></li><li class="depth-1"><a href="propeller.downsample.html#var-convert-to-soft-error"><div class="inner"><span>convert-to-soft-error</span></div></a></li><li class="depth-1"><a href="propeller.downsample.html#var-get-distance-between-cases"><div class="inner"><span>get-distance-between-cases</span></div></a></li><li class="depth-1"><a href="propeller.downsample.html#var-initialize-case-distances"><div class="inner"><span>initialize-case-distances</span></div></a></li><li class="depth-1"><a href="propeller.downsample.html#var-merge-map-lists-at-index"><div class="inner"><span>merge-map-lists-at-index</span></div></a></li><li class="depth-1"><a href="propeller.downsample.html#var-replace-close-zero-with-zero"><div class="inner"><span>replace-close-zero-with-zero</span></div></a></li><li class="depth-1"><a href="propeller.downsample.html#var-replace-mins-with-zero"><div class="inner"><span>replace-mins-with-zero</span></div></a></li><li class="depth-1"><a href="propeller.downsample.html#var-select-downsample-maxmin"><div class="inner"><span>select-downsample-maxmin</span></div></a></li><li class="depth-1"><a href="propeller.downsample.html#var-select-downsample-maxmin-adaptive"><div class="inner"><span>select-downsample-maxmin-adaptive</span></div></a></li><li class="depth-1"><a href="propeller.downsample.html#var-select-downsample-random"><div class="inner"><span>select-downsample-random</span></div></a></li><li class="depth-1"><a href="propeller.downsample.html#var-update-at-indices"><div class="inner"><span>update-at-indices</span></div></a></li><li class="depth-1"><a href="propeller.downsample.html#var-update-case-distances"><div class="inner"><span>update-case-distances</span></div></a></li></ul></div><div class="namespace-docs" id="content"><h1 class="anchor" id="top">propeller.downsample</h1><div class="doc"><div class="markdown"><p>FIXME: write docs</p>
</div></div><div class="public anchor" id="var-assign-indices-to-data"><h3>assign-indices-to-data</h3><div class="usage"><code>(assign-indices-to-data training-data argmap)</code></div><div class="doc"><div class="markdown"><p>assigns an index to each training case in order to differentiate them when downsampling</p>
</div></div></div><div class="public anchor" id="var-convert-to-elite-error"><h3>convert-to-elite-error</h3><div class="usage"><code>(convert-to-elite-error errors)</code></div><div class="doc"><div class="markdown"><p>converts a set of errors into a list where all the elite errors are replaced with 0s so that we can use it in the selection of down-samples with elite/not-elite selection</p>
</div></div></div><div class="public anchor" id="var-convert-to-soft-error"><h3>convert-to-soft-error</h3><div class="usage"><code>(convert-to-soft-error errors delta)</code></div><div class="doc"><div class="markdown"><p>FIXME: write docs</p>
</div></div></div><div class="public anchor" id="var-get-distance-between-cases"><h3>get-distance-between-cases</h3><div class="usage"><code>(get-distance-between-cases error-lists case-index-1 case-index-2)</code></div><div class="doc"><div class="markdown"><p>returns the distance between two cases given a list of individual error vectors, and the index these cases exist in the error vector. Only makes the distinction between zero and nonzero errors</p>
</div></div></div><div class="public anchor" id="var-initialize-case-distances"><h3>initialize-case-distances</h3><div class="usage"><code>(initialize-case-distances {:keys [training-data population-size], :as argmap})</code></div><div class="doc"><div class="markdown"><p>FIXME: write docs</p>
</div></div></div><div class="public anchor" id="var-merge-map-lists-at-index"><h3>merge-map-lists-at-index</h3><div class="usage"><code>(merge-map-lists-at-index big-list small-list)</code></div><div class="doc"><div class="markdown"><p>merges two lists of maps, replacing the maps in the big list with their corresponding (based on index) maps in the small list</p>
</div></div></div><div class="public anchor" id="var-replace-close-zero-with-zero"><h3>replace-close-zero-with-zero</h3><div class="usage"><code>(replace-close-zero-with-zero coll delta)</code></div><div class="doc"><div class="markdown"><p>replaces values within a delta of zero with zero, used for regression problems</p>
</div></div></div><div class="public anchor" id="var-replace-mins-with-zero"><h3>replace-mins-with-zero</h3><div class="usage"><code>(replace-mins-with-zero coll)</code></div><div class="doc"><div class="markdown"><p>replaces the minimum value(s) in a list with zero</p>
</div></div></div><div class="public anchor" id="var-select-downsample-maxmin"><h3>select-downsample-maxmin</h3><div class="usage"><code>(select-downsample-maxmin training-data {:keys [downsample-rate]})</code></div><div class="doc"><div class="markdown"><p>selects a downsample that has it’s cases maximally far away by sequentially adding cases to the downsample that have their closest case maximally far away</p>
</div></div></div><div class="public anchor" id="var-select-downsample-maxmin-adaptive"><h3>select-downsample-maxmin-adaptive</h3><div class="usage"><code>(select-downsample-maxmin-adaptive training-data {:keys [case-delta]})</code></div><div class="doc"><div class="markdown"><p>selects a downsample that has it’s cases maximally far away by sequentially adding cases to the downsample that have their closest case maximally far away automatically stops when the maximum minimum distance is below delta</p>
</div></div></div><div class="public anchor" id="var-select-downsample-random"><h3>select-downsample-random</h3><div class="usage"><code>(select-downsample-random training-data {:keys [downsample-rate]})</code></div><div class="doc"><div class="markdown"><p>Selects a downsample from the training cases and returns it</p>
</div></div></div><div class="public anchor" id="var-update-at-indices"><h3>update-at-indices</h3><div class="usage"><code>(update-at-indices big-vec small-vec indices)</code></div><div class="doc"><div class="markdown"><p>merges two vectors at the indices provided by a third vector</p>
</div></div></div><div class="public anchor" id="var-update-case-distances"><h3>update-case-distances</h3><div class="usage"><code>(update-case-distances evaluated-pop ds-data training-data ids-type)</code><code>(update-case-distances evaluated-pop ds-data training-data ids-type solution-threshold)</code></div><div class="doc"><div class="markdown"><p>updates the case distance field of training-data list, should be called after evaluation of individuals evaluated-pop should be a list of individuals that all have the :errors field with a list of this individuals performance on the each case in the training-data, in order. ids-type is :elite to use elite/not-elite, :soft to consider near solves, and :solved to use solve/not-solved</p>
</div></div></div></div></body></html>
Reference in New Issue View Git Blame Copy Permalink