Nic McPhee
66ec0a1ebd
Address the possibility of vectors being empty in vector/_first
...
The original version just used the built-in `first`, which returns `nil` if you give it an empty collection, which is almost certainly not a useful behavior.
This changes it to return `:ignore-instruction` if the vector is empty, thereby leaving all the stacks unchanged.
2020-12-17 18:45:06 -06:00
Nic McPhee
f2eecc774f
Add tests for vector/_first
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These turned up an oversight in the implementation in `vector/_first` that is addressed in the next commit.
2020-12-17 18:42:57 -06:00
Erik Rauer
b3d9d89f4c
Allow instructions to indicate they should be ignored
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`make-instruction` will ignore any instructions that return `:ignore-instruction`. This allows instructions to be skipped without consuming their arguments.
2020-12-17 18:32:41 -06:00
Nic McPhee
fc26886815
Fix bugs in vector/_subvec
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There were two independent bugs in `vector/_subvec` that were turned up by our `test.check` testing.
The first was that the order of the arguments was wrong and `stop-raw` and `start-raw` were flipped.
The second was that `stop` wasn't max'ed with 0, which meant it could sometimes be negative, leading to an `IndexOutOfBoundsException`.
2020-12-17 15:58:11 -06:00
Nic McPhee
d1e863a23a
Start test.check tests on vector instructions
...
This is a start on using `test.check` to write tests for the vector instructions. We currently have tests for:
* `vector/_emptyvector`
* `vector/_indexof`
* `vector/_subvec`
There are _lots_ of other functions still to be tested.
This did reveal errors in `vector/_subvec`, which will be addressed in the next commit.
We used macros to make it easy to generate tests for each of the four vector types; this should be extensible to additional vector types in the future if needed.
2020-12-17 15:56:27 -06:00
Nic McPhee
a6e195eb0e
Add data and .calva to .gitignore
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We don't want to be committing the data files or the Calva files generated by running Clojure in VS Code. This fixes that.
2020-12-17 08:15:40 -06:00
Lee Spector
8cd1a79da3
Pass argmap to report
2020-12-09 10:50:49 -05:00
Lee Spector
2f4adfde7a
Pass argmap to report
2020-12-09 10:49:53 -05:00
Lee Spector
b68cf4ad75
Pass argmap to plushy->post in report
2020-12-09 10:46:02 -05:00
Lee Spector
40ac1c73a4
Add uniform-replacement
2020-12-09 10:44:57 -05:00
Lee Spector
0af6aa095e
Add uniform-replacement; pass argmap to plushy->push in report
2020-12-09 10:42:05 -05:00
Lee Spector
0a5a655181
Make genetic operator dispatch more modular and extensible
2020-12-08 22:59:44 -05:00
Lee Spector
180a7fdbe0
Provide more modular and and extensible approach to genetic operator dispatch
2020-12-08 22:53:37 -05:00
Lee Spector
09d5455da3
Remove extraneous argmap argument
2020-12-08 12:21:40 -05:00
Lee Spector
aed8eb8a76
Fix handling of boolean input values
2020-12-08 12:20:26 -05:00
Lee Spector
d49f9e4bf0
Remove extraneous argmap argument; experiment with valiant
2020-12-08 12:12:23 -05:00
Lee Spector
bb916c2ad3
Fix handling of false boolean input values; continue development of valiant problem
2020-12-07 20:19:59 -05:00
Lee Spector
14f63f880b
Fix comment and error message in handle-input-instruction; begin developing valiant problem
2020-12-07 13:58:34 -05:00
Lee Spector
7a16770cb9
Merge pull request #9 from NicMcPhee/command-line-problem-specification
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Support command-line problem specification
2020-12-04 18:49:20 -05:00
Lee Spector
7ecc32f13e
Merge branch 'master' of https://github.com/lspector/propeller
2020-12-04 18:40:34 -05:00
Lee Spector
14e6cfcd08
Reformat
2020-11-29 22:29:31 -05:00
Lee Spector
d309869919
Comment out shutdown-agents since agents not currently used and this messes up REPL sessions
2020-11-29 22:16:29 -05:00
Lee Spector
4783d6695a
Fix string-classification problem by adding train-and-test-data and fixing wrong instruction name
2020-11-29 22:09:36 -05:00
Lee Spector
0c6ebde41b
Fix :flip that should be :diploid-flip
2020-11-29 21:43:00 -05:00
Lee Spector
81f2c3197f
Distinguish flip rate from flip probability
2020-11-29 21:32:42 -05:00
Nic McPhee
e05290d87c
Support command-line problem specification
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This change uses the first command-line argument as the problem, which is assumed to be a namespace under `propeller.problems`. This will load the `instructions` and `error-function` from that namespace. If no problem is specified, then a (hopefully) helpful error is generated and the programs exits.
This allows us to call Propeller with calls such as:
```
lein run software.smallest
```
2020-11-24 16:42:22 -06:00
Lee Spector
f2e4cf0e1e
Merge pull request #8 from NicMcPhee/limit-dup-times
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Limit stack size when using `_dup_times` and `_dup_items`
2020-11-24 17:24:32 -05:00
Nic McPhee
da84852245
Move max-stack-items to globals
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This creates a `push/utils/globals/cljc` similar to that created by @mcgirjau and moved the `max-stack-items` def to that namespace, updating `polymorphic` as necessary.
2020-11-24 16:00:03 -06:00
Nic McPhee
f675f69276
Merge branch 'master' into limit-dup-times
2020-11-24 15:53:36 -06:00
Nic McPhee
0ca5e77d7a
Merge remote-tracking branch 'upstream/master'
2020-11-24 15:19:29 -06:00
Lee Spector
35ac379f06
Add more examples to session.clj
2020-11-24 16:09:44 -05:00
Lee Spector
628329e6bf
Resolve merge conflict
2020-11-23 21:28:51 -05:00
Lee Spector
a8e9de97ce
Fix peek-stack for false on boolean stack
2020-11-23 09:57:04 -05:00
Lee Spector
3ba030ceec
Add train/test data support to simple-regression problem
2020-11-23 09:51:19 -05:00
Lee Spector
509c22b79c
Fix naming clash in new-individual
2020-11-23 07:49:40 -05:00
Lee Spector
f8bdacc388
Remove debugging printing; update session.clj
2020-11-22 23:35:07 -05:00
Lee Spector
28da548e4c
Undo wrong fix for exec_if; fix peek-stack for false on boolean stack
2020-11-22 23:28:02 -05:00
Lee Spector
0482ccccf5
Correct order of clauses for exec_if
2020-11-22 22:05:42 -05:00
Lee Spector
97de757f57
Begin bringing session.clj up to date
2020-11-22 21:57:29 -05:00
Lee Spector
b6a9a410c1
Call diploid-flip when appropriate; make new-individual robust to missing rates
2020-11-22 21:40:57 -05:00
Lee Spector
224d33c19d
Add diploid-flip genetic operator
2020-11-22 21:32:49 -05:00
Lee Spector
4df6ea7fdd
Use diploid operators when called for; fix bug in diploid-uniform-addition
2020-11-22 21:27:07 -05:00
Lee Spector
67fcdb13b5
Undo deletion rate adjustment (done elsewhere), remove argmap arguments to genetic operators, define diploid genetic operators
2020-11-22 21:18:30 -05:00
Lee Spector
55644a9b6d
Make crossover, uniform-addition, and uniform-deletion take argmap arguments
2020-11-22 21:06:39 -05:00
Lee Spector
aadc28d371
Make plushy->push use an empty argmap if none was passed.
2020-11-22 16:35:46 -05:00
Lee Spector
0a5e17195e
Scale UMAD deletion rate from addion rate for size neutrality
2020-11-22 16:30:25 -05:00
Lee Spector
bd5f4aba40
Remove extraneous 2
2020-11-22 16:25:37 -05:00
Lee Spector
12002d17a6
Make plushy->push obey :diploid setting
2020-11-22 16:19:24 -05:00
Lee Spector
4516339412
Pass argmap to plushy->push
2020-11-22 16:14:01 -05:00
Lee Spector
f47e5e924a
Merge pull request #7 from NicMcPhee/fix-random-int-generation
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Fix bug in `random-int`
2020-11-10 21:06:22 -05:00
